I’ve been on a hunt for more dairy-free and gluten-free protein snacks. And you’d be shocked at just how difficult they are to find! Even the gluten-free protein snacks are never non-dairy. Aside from my single serve protein cookie (which is both gluten-free, dairy-free, and contains over 30 grams of protein!) and my high-protein snack boxes – my protein snack options feel very limited. *Enter these 6-ingredient gluten-free and dairy-free protein muffins.*

These protein muffins are entirely gluten-free, dairy-free, made in just one bowl, with 6 very simple ingredients! They’re also just as light, fluffy, and completely delicious as any other muffin. I love adding chocolate chips to mine, but feel free to keep ’em plain or add whatever mix-in you’d like. Also, this recipe makes 6 muffins, so you might want to consider a double batch… 😉

protein muffins with a bite taken out.

Why You’ll Love These Protein Muffins

  • Gluten-Free & Grain-Free: Made with almond flour, these muffins are naturally gluten-free.
  • Dairy-Free: No dairy ingredients, suitable for lactose-intolerant individuals.
  • No Added Sugar: Sweetened naturally with applesauce.
  • High Protein: Packed with protein from eggs, peanut butter, and protein powder.
  • One-Bowl Recipe: Minimal cleanup required.
  • Customizable: Add your favorite mix-ins like nuts, seeds, or dried fruit.

Frequently Asked Questions

What kind of protein powder do you recommend?
For best results, use a plant-based protein powder or a whey protein blend. Avoid using pure whey isolate, as it may result in a dense texture.

How do I make these low carb/keto?
To reduce the carb content, replace applesauce with mashed avocado or pumpkin puree, and use a low-carb sweetener if desired.

What can I use instead of almond flour?
Coconut flour can be used as a substitute, but it absorbs more moisture. Use ¼ cup of coconut flour in place of 1 cup almond flour and consider adding an extra egg to maintain moisture.

How should I store these protein muffins?
Store the muffins in an airtight container at room temperature for up to 3 days, or refrigerate for up to a week. They can also be frozen for up to 3 months.

protein muffins with chocolate chips on a table.

Different Mix-Ins

  • Fresh or Dried Fruit: Blueberries, raspberries, or chopped dried apricots.
  • Nuts & Seeds: Chopped walnuts, pecans, or chia seeds.
  • Spices: Cinnamon, nutmeg, or pumpkin spice for added flavor.
  • Zest: Lemon or orange zest for a citrusy twist.
protein muffins on a table with chocolate chips on top.
5 from 1 vote

6-Ingredient Protein Muffins (20g protein!)

These easy protein muffins are made with just 6 simple ingredients in one bowl – perfect for a healthy, high-protein snack or breakfast. They’re gluten-free, dairy-free, and naturally sweetened with applesauce, making them a nutritious option the whole family will love. With added vanilla protein powder and optional chocolate chips, these muffins are as delicious as they are nourishing!
Print Pin Rate
Prep Time: 5 minutes
Cook Time: 20 minutes
Total Time: 25 minutes
Servings: 6 muffins

Equipment

  • 1 large bowl
  • 1 muffin pan

Ingredients

  • 1 cup applesauce
  • 2 eggs
  • 1/4 cup creamy peanut butter unsweetened (or any nut/seed butter)
  • 1 cup almond flour
  • 1/2 cup vanilla protein powder
  • 1 teaspoon baking powder
  • 1/2 cup chocolate chips optional

Instructions

  • Preheat oven to 350° Fahrenheit and line a muffin tin with muffin liners.
  • Mix together the applesauce, eggs, and peanut butter in a large bowl. Add in the almond flour, protein powder, and baking powder then mix until everything is fully combined.
  • Fold in the chocolate chips (or any other mix-in you’d like!), then scoop ¼ cup of muffin batter into each muffin liner. Bake the muffins for 20-25 minutes, or until a toothpick inserted down the center of a muffin comes out clean.
  • Remove the muffins from the oven and let cool completely before storing or enjoying!

Nutrition

Serving: 1muffin | Calories: 240kcal | Carbohydrates: 11g | Protein: 20g | Fat: 16g | Sugar: 5g

2 Comments

  1. Gayle S

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    5 stars
    My husband & I really enjoyed these! I used 2Tbl almond butter & 2 Tbl PB powder to help with calories & fat. They turned out yummy. I did bake them for about 5-8 min longer since the 6 cups were full. I will be making these again; love getting in more protein, especially in a sweet treat! Thank you Sam!

5 from 1 vote

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